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Changing jobs or holding two jobs: how salary tax goes wrong

CA Finalist, ACCA FinalistReviewed by Chartered Advisory Team of Chartered Accountants
Tax calculators guide: Salary tax with two or more employers in Pakistan
Quick answer: Each employer annualises only the salary it pays, so two employers in one tax year each project a full year of income you did not earn from them. The result is usually over-deduction, occasionally under-deduction, and almost always a figure that cannot be reconciled without both certificates. The fix is the previous employer certificate, obtained before the new payroll runs.

Changing jobs mid-year is the most common cause of an incorrect salary tax position in Pakistan, and neither employer has done anything wrong. The mechanics of section 149 simply do not work when the taxpayer moves and the information does not travel with them.

Why it goes wrong

Section 149 requires an employer to project full-year taxable salary, compute the annual slab tax, and spread it across payroll months. The projection is made from what that employer pays. So when you work six months at one company and six at another:

  • Employer A projects your salary with them as if it continued for twelve months.
  • Employer B does the same with theirs.
  • Neither figure is your actual annual taxable salary.
  • Because the slabs are progressive, two understated annual projections each attract lower marginal rates than the true combined figure — or, where the second salary is much higher, the reverse.

Worked: the over-deduction case

Worked: the over-deduction case
LineAmount
Employer A: six months at Rs 250,000Rs 1,500,000
Employer B: six months at Rs 300,000Rs 1,800,000
Actual annual taxable salaryRs 3,300,000
Correct annual tax: Rs 316,000 + 25% × Rs 100,000Rs 341,000
A deducts half of its Rs 3,000,000 projection tax (Rs 276,000)Rs 138,000
B deducts half of its Rs 3,600,000 projection tax (Rs 416,000)Rs 208,000
Total deductedRs 346,000
Over-deducted, recoverable through the returnRs 5,000
Salaried income tax return filing

You draw a salary, tax is deducted at source every month, and you want the return filed properly without spending a weekend inside IRIS.

Fee Rs 3,500Turnaround 3–5 working days

Worked: the under-deduction case

Now reverse the salaries — six months at Rs 150,000 followed by six at Rs 450,000:

  • Actual annual taxable salary: Rs 3,600,000. Correct annual tax: Rs 416,000.
  • A projects Rs 1,800,000, annual tax Rs 72,000, deducts half: Rs 36,000.
  • B projects Rs 5,400,000, annual tax Rs 917,000, deducts half: Rs 458,500.
  • Total deducted: Rs 494,500 — an over-deduction of Rs 78,500 in this configuration.
The pattern: the direction and size of the error depend entirely on how the two salaries compare and where each projection lands in the slab table. That is why you cannot assume a refund — you have to compute the actual annual position. See the slab structure.

The fix: the certificate chain

A new employer can compute correctly if it has the previous employer numbers. The sequence:

  1. On leaving, request the salary and tax deduction certificate for the part-year. Ask before your last day, while you are still on the system.
  2. Check the figures against your payslips — salary paid, benefits valued, tax deducted year to date.
  3. Give it to the new employer before the first payroll run, not at year end.
  4. The new employer then projects using actual salary to date plus its own remaining months, and subtracts the tax already deducted.

Done properly, the deduction across the year lands close to correct and there is no material balance at filing. Employers should treat requesting this certificate as part of onboarding — see payroll compliance.

Holding two jobs at once

Concurrent employment is harder because there is no certificate chain to fix it. Both salaries are aggregated into one annual figure and the slabs applied once, but each employer withholds in isolation.

Practical approach:

  • Compute your own correct annual liability on the combined figure early in the year.
  • Compare it to what the two employers will collectively deduct.
  • Set the difference aside monthly, because it will fall due at filing.
  • Keep both certificates, since you will need both to evidence the credits.

What to hand over and collect when you move

Treat the job change as a document exchange rather than a clean break. Before your last day:

  • Request the salary and tax deduction certificate covering the part-year, and check it against your payslips — salary paid, benefits valued, tax deducted to date.
  • Download your payslips while you still have system access. Obtaining them after your account is deactivated is slow and sometimes impossible.
  • Confirm the final settlement computation. A leaver should be taxed on actual part-year salary, not on the original twelve-month projection — ask for the recomputation if the final payslip looks like a normal month.
  • Note any benefit that ceased mid-year, since its valuation should be prorated rather than counted for a full year.

Then give the certificate to the new employer before the first payroll run. Employers who ask for it at onboarding rather than at year end avoid the whole problem — see payroll compliance.

Settling it at filing

Whatever the direction, the return is where it resolves:

  1. Declare total salary from all employers as one figure under the salary head.
  2. Claim tax deducted from every certificate, and verify each appears against your registration in FBR records.
  3. Compute the correct annual tax on the combined figure.
  4. Pay any shortfall, or claim the excess — refunds.

Section 149 deduction is adjustable, so an over-deduction is genuinely recoverable — but only through a filed return with the certificates attached. People who change jobs and do not file simply leave the money behind. See the filing sequence.

Sources

This guide is written against the official and clearly labelled professional references below. Rates, thresholds and portal procedures change between reviews, so open the primary source before relying on a figure.

Questions people also ask

Do I have to tell my new employer what I earned before?

For the tax to be computed correctly, yes — through the salary and tax deduction certificate from your previous employer covering the part of the tax year already elapsed. Without it your new employer projects only its own months, understates annual taxable salary, and the shortfall lands on you at filing. It is a tax document rather than a disclosure of your negotiating position.

I hold two jobs at the same time. How is that taxed?

Both salaries are aggregated into a single annual taxable figure and the slabs applied once to the total. Each employer withholds on its own payroll without visibility of the other, so the combined deduction rarely matches the correct annual tax. Filing the return is what settles it, and the difference can be substantial where both salaries are meaningful.

Which employer should deduct the tax on my combined salary?

Each deducts on what it pays. There is no mechanism by which one employer withholds on another salary. Where you hold two concurrent jobs, expect to settle a balance at filing rather than expecting payroll to get the aggregate right, and set the cash aside for it during the year.

My old employer will not issue the certificate. What are my options?

Request it in writing and keep the request. In the meantime, payslips support the salary figure, and you should check FBR records for the tax actually deducted against your registration — that is the figure your credit depends on. If the deduction was never deposited, the certificate would not have sustained the credit anyway.

Will I definitely get a refund after changing jobs?

Usually there is an over-deduction, but not always. Where the second salary is substantially higher than the first, the combined deduction can fall short of the correct annual tax and you may owe rather than be owed. Compute the actual position rather than assuming a refund and being surprised by a payment.

Scope note: General educational information for Pakistan, not a legal opinion or a substitute for advice based on your documents. Law, notifications, portal procedures and individual facts can change the result.
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